Alrite so you want to do a motor swap well its fairly easy for the most part......
I may answer your questions in which ever way i see fit but i will try to answer them all to the best that i can....
2) specialty tools i dont know if they are special but this also coincides with 1) a cherry picker engine hoist ect works wonders as well as a load leveler, a pickle fork and a 32mm axle nut a breaker bar and if your really lucky to have them a nice set of air tools works wonders.....
3) good idea lol its alot easier that way tho id suggest unbolting the clutch inspection plate while the engine is in its somewhat of a bitch to get to and you need to take that off in order to remove the trans from the engine...
4 yes you can use your harness tho the b8 runs a 1 wire 02 so id suggest keeping your b8 ecu for now but if you think its not running right pop in the b7 since its only a 02 you can either dpin and wire up the 02 to the harness(i made a list of things in i think the wiring section to help with that to make your b8 harness a b7
1) besides what i said up above if you have a manual trans which im assuming id say pop the upper ball joint and the outer tie rod and maybe just for a little extra space the lower shock tower bolt and nut....and just pop your axle from the trans and pull back on the arm and to reinstall slide one end into your trans make sure its up to the pin and give it a good push and pops right back in (this works for me but if you want remove the whole axle im just lazy
another helpful hint keep your bolts and anything you take off in one place also try and assemble as much of the motor out of the car as you can for me another lazy but easy way of doing things.
only other word of advice just be mythotical take pictures if you wish or do what ever it takes to allow you to remember hwo everything goes i know in my first swap it was a little fuzzy remembering all the connections etc. but its fairly easy to do thats why i love honda they make things easy to understand in my book goodluck and enjoy!
p.s. my advice dont try and do it in less then a day take your time a weekend should suffice if you have the other engine ready to go .....